PUBLISHED WORK

Members of the Yadavalli lab are underlined

A complete list of publications can be accessed at the following:

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QUEUOSINE BIOSYNTHETIC ENZYME, QUEE MOONLIGHTS AS A CELL DIVISION REGULATOR

Adeleye SA and Yadavalli SS. bioRxiv 2023; doi: 10.1101/2023.10.31.565030 (Accepted at PLOS Genetics)

LINKING GENOTYPIC AND PHENOTYPIC CHANGES IN THE E. COLI LONG-TERM EVOLUTION EXPERIMENT USING METABOLOMICS

Favate JS, Skalenko K, Chiles E, Su X, Yadavalli SS, and Shah P. eLife 2023; doi: 10.7554/eLife.87039.2

BACTERIAL SMALL MEMBRANE PROTEINS: THE SWISS ARMY KNIFE OF REGULATORS AT THE LIPID BILAYER

Yadavalli SS & Yuan J. J Bacteriol. 2022; doi: 10.1128/JB.00344-21

Featured in the Special Issue on 'Small Proteins'

THE LANDSCAPE OF TRANSCRIPTIONAL AND TRANSLATIONAL CHANGES OVER 22 YEARS OF BACTERIAL ADAPTATION

Favate JS, Liang S, Cope AL, Yadavalli SS, and Shah P. eLife 2022; doi: 10.7554/eLife.81979

EXPLORING RIBOSOME-POSITIONING ON TRANSLATING TRANSCRIPTS WITH RIBOSOME PROFILING

Cope AL†, Vellappan S†, Favate JS, Skalenko KS, Yadavalli SS, and Shah P. In: Dassi E. (eds) Post-Transcriptional Gene Regulation. Methods Mol Biol. 2022 Humana Press, New York, NY. †Equal contribution.

FUNCTIONAL DETERMINANTS OF A SMALL PROTEIN CONTROLLING A BROADLY CONSERVED BACTERIAL SENSOR KINASE

Yadavalli SS*, Goh T, Carey JN, Malengo G, Vellappan S, Nickels BE, Sourjik V, Goulian M*, Yuan J*. J Bacteriol. 2020; doi: 10.1128/JB.00305-20. *co-corresponding authors.

Spotlight selection for August 2020 issue

TRNA METHYLATION IS A GLOBAL DETERMINANT OF BACTERIAL MULTI-DRUG RESISTANCE

Masuda I, Matsubara R, Christian T, Rojas ER, Yadavalli SS, Zhang L, Goulian M, Foster LJ, Huang KC, Hou YM. Cell Syst. 2019 Apr 24;8(4):302-314.e8. doi: 10.1016/j.cels.2019.03.008.

BIOACTIVE CELL-LIKE HYBRIDS FROM DENDRIMERSOMES WITH A HUMAN CELL MEMBRANE AND ITS COMPONENTS

Yadavalli SS, Xiao Q, Sherman SE, Hasley WD, Klein ML, Goulian M, Percec V. Proc Natl Acad Sci U S A. 2019 Jan 15;116(3):744-752. doi: 10.1073/pnas.1811307116.

NATURAL VARIATION OF A SENSOR KINASE CONTROLLING A CONSERVED STRESS RESPONSE PATHWAY IN ESCHERICHIA COLI

Roggiani M, Yadavalli SS, Goulian M. PLoS Genet. 2017 Nov 15;13(11):e1007101. doi: 10.1371/journal.pgen.1007101.

SELF-INTERRUPTED SYNTHESIS OF STERICALLY HINDERED ALIPHATIC POLYAMIDE DENDRIMERS

Jishkariani D, MacDermaid CM, Timsina YN, Grama S, Gillani SS, Divar M, Yadavalli SS, Moussodia RO, Leowanawat P, Berrios Camacho AM, Walter R, Goulian M, Klein ML, Percec V.Proc Natl Acad Sci U S A. 2017 Mar 21;114(12):E2275-E2284. doi: 10.1073/pnas.1700922114.

SELF-SORTING AND COASSEMBLY OF FLUORINATED, HYDROGENATED, AND HYBRID JANUS DENDRIMERS INTO DENDRIMERSOMES

Xiao Q, Rubien JD, Wang Z, Reed EH, Hammer DA, Sahoo D, Heiney PA, Yadavalli SS, Goulian M, Wilner SE, Baumgart T, Vinogradov SA, Klein ML, Percec V. J Am Chem Soc. 2016 Sep 28;138(38):12655-63. doi: 10.1021/jacs.6b08069.

ANTIMICROBIAL PEPTIDES TRIGGER A DIVISION BLOCK IN ESCHERICHIA COLI THROUGH STIMULATION OF A SIGNALLING SYSTEM

Yadavalli SS*, Carey J, Chen AI, Leibman R, Stern A, Roggiani M, Lippa A and Goulian M*. Nat Commun. (2016) doi: 10.1038/ncomms12340. *Co-corresponding authors.

F1000Prime recommended

BIOACTIVE CELL-LIKE HYBRIDS COASSEMBLED FROM (GLYCO)DENDRIMERSOMES WITH BACTERIAL MEMBRANES

Xiao Q†, Yadavalli SS†, Zhang S, Sherman SE, Fiorin E, da Silva L, Wilson DA, Hammer DA, André S, Gabius HJ, Klein ML, Goulian M, Percec V. Proc Natl Acad Sci U S A. 2016 Mar 1;113(9):E1134-41. doi: 10.1073/pnas.1525589113. †Equal contribution.

SELECTION OF TRNA CHARGING QUALITY CONTROL MECHANISMS THAT INCREASE MISTRANSLATION OF THE GENETIC CODE

Yadavalli SS, Ibba M. Nucleic Acids Res. 2013 Jan;41(2):1104-12. doi: 10.1093/nar/gks1240.

QUALITY CONTROL IN AMINOACYL-TRNA SYNTHESIS ITS ROLE IN TRANSLATIONAL FIDELITY

Yadavalli SS, Ibba M. Adv Protein Chem Struct Biol. 2012;86:1-43. doi: 10.1016/B978-0-12-386497-0.00001-3.

MITOCHONDRIAL PHENYLALANYL-TRNA SYNTHETASE MUTATIONS UNDERLIE FATAL INFANTILE ALPERS ENCEPHALOPATHY

Elo JM†, Yadavalli SS†, Euro L, Isohanni P, Götz A, Carroll CJ, Valanne L, Alkuraya FS, Uusimaa J, Paetau A, Caruso EM, Pihko H, Ibba M, Tyynismaa H, Suomalainen A. Hum Mol Genet. 2012 Oct 15;21(20):4521-9. doi: 10.1093/hmg/dds294. †Equal contribution.

MITOCHONDRIAL AMINOACYL-TRNA SYNTHETASE SINGLE-NUCLEOTIDE POLYMORPHISMS THAT LEAD TO DEFECTS IN REFOLDING BUT NOT AMINOACYLATION

Banerjee R, Reynolds NM, Yadavalli SS, Rice C, Roy H, Banerjee P, Alexander RW, Ibba M. J Mol Biol. 2011 Jul 8;410(2):280-93. doi: 10.1016/j.jmb.2011.05.011.

TRNAS: CELLULAR BARCODES FOR AMINO ACIDS

Banerjee R, Chen S, Dare K, Gilreath M, Praetorius-Ibba M, Raina M, Reynolds NM, Rogers T, Roy H, Yadavalli SS, Ibba M. FEBS Lett. 2010 Jan 21;584(2):387-95. doi: 10.1016/j.febslet.2009.11.013.

LARGE-SCALE MOVEMENT OF FUNCTIONAL DOMAINS FACILITATES AMINOACYLATION BY HUMAN MITOCHONDRIAL PHENYLALANYL-TRNA SYNTHETASE

Yadavalli SS, Klipcan L, Zozulya A, Banerjee R, Svergun D, Safro M, Ibba M. FEBS Lett. 2009 Oct 6;583(19):3204-8. doi: 10.1016/j.febslet.2009.09.008.